BRYAN W JONES portrait
  • Associate Professor, Ophthalmology & Visual Science
  • Research Associate Professor, Ophthalmology & Visual Science
801-585-5954

Research Statement

Research Interests: Retinal vision, synaptic transmission, neuronal circuitry, retinal cell biology, metabolism, connectomics

Presentations

  • MICROCOM II, Berlin Germany Large-Scale Transmission Electron Microscopy and Connectomics. , , 2021.
  • Google Chicago Office. , , 2018.
  • Invited Speaker, ARUP Laboratories, Speaker, ARUP Laboratories, ARUP advanced technologies. , , 2005.
  • National Eye Institute, National Institutes of Health. , , 2021.
  • Microscopy and Microanalysis Meeting, 2021 Tools and Approaches for Assembly, Review, and Analysis of Large-Scale Electron Microscopy. , , 2021.
  • National Science Foundation, NeuroNEX Synapses, Gap Junctions, Adherens, and Tight Junctions, Oh My! , , 2021.
  • 9th Optic Nerve Meeting, Obergurgl Austria. , , 2019.
  • Brain-Mind Meeting, Stanford, California. , , 2019.
  • NeuroNex Conference, Austin Texas. , , 2019.
  • Cambridge University, Cambridge England. , , 2019.
  • The Karolinska Institute, Stockholm Sweden. , , 2019.
  • Johns Hopkins. , , 2019.
  • Berlin HHMI Connectomics Conference Berlin, Germany. , , 2019.
  • SUNY College of Optometry. , , 2019.
  • Ryan Initiative for Macular Research Los Angeles, California. , , 2019.
  • University of Colorado, Anschutz Medical Campus. , , 2019.
  • 8th Optic Nerve Meeting, Obergurgl Austria. , , 2018.
  • Visionarium, Tvärminne Zoological Research Station, Tvärminne Finland. , , 2018.
  • Fire, Future In Review Conference. The Eye-Brain Machine: Computing's Next Model? , , 2018.
    https://www.youtube.com/watch?v=OaKHliot2vU&t=1s
  • University of New South Wales / Centre For Eye Health Sydney, Australia. , , 2018.
  • Carnegie Mellon University. , , 2017.
  • The Eye And The Chip, Detroit Michigan. , , 2017.
  • HHMI Janelia Farm. , , 2017.
  • Burke Rehabilitation Hospital, Cornell University. , , 2017.
  • Peking University, Beijing China. , , 2017.
  • Human Retinal Plasticity In Response to Retinal Deafferentation, Tübingen Germany. , , 2014.
  • Retinal Plasticity, University of Washington. , , 2014.
  • Lasker Conference On Retinal Degeneration And Vision Rescue. , , 2014.
  • Utah Chapter Foundation Fighting Blindness. , , 2014.
  • Medical College of Wisconsin, Retinal Degeneration And Remodeling. , , 2013.
  • NIH/NEI Retinal Remodeling Retinas, How Are They Wired? How Does Wiring Change In Disease? , , 2013.
  • Americal Academy of Optometry. , , 2013.
  • ISER, Neural Retina, Berlin, Germany. , , 2012.
  • Clinical Faculty Day, Moran Eye Center. , , 2012.
  • Neurology Grand Rounds. , , 2011.
  • FASEB, Retinal Cell Biology Mtg, Saxtons River, VT. 2010. , , 2010.
  • University of Lousiville, Ophthalmology. , , 2010.
  • Stanford University. , , 2009.
  • The 2nd Bonn Dialogue International Symposium on Visual Prosthesis. , , 2009.
  • Apple Computer Advanced Computational Research Group. , , 2009.
  • ARUP Laboratories Institute for Clinical and Experimental Pathology. , , 2009.
  • Torsten Wiesel Research Institute, West China Hospital, Sichuan University. , , 2008.
  • University of Texas Health Sciences Center. , , 2008.
  • Huntsman Cancer Institute. , , 2008.
  • GlaxoSmithKleine. , , 2008.
  • Ophthalmic Photographers Society. , , 2008.
  • Scientific Computing Institute/SCI. , , 2007.
  • Microscopy and Microanalysis Meeting. , , 2007.
  • University of Leicester, Dept. of Toxicology. , , 2007.
  • Invited speaker for the 2006 Bio Image Informatics seminar at UCSB. , , 2006.
  • USU Center for Integrated BioSystems. , , 2006.
  • NIH/NCRR Center for Integrative Biomedical Computing. , , 2006.
  • USU Center for Integrated BioSystems. , , 2006.
  • NIH/NCRR Center for Integrative Biomedical Computing. , , 2006.
  • Medical University South Carolina Ophthalmology. , , 2006.
  • Medical University South Carolina, Department of Ophthalmology. , , 2006.
  • UCSB Center for Integrative Biomedical Computing. , , 2006.
  • Bio-Image Informatics, UCSB. , , 2006.
  • UCSB Center for Bio-Image and Informatics. Computational Molecular Phenotyping. , , 2006.
  • Visualizing the Metabolome. , , 2005.
  • ARUP Institute for Clincal and Experimental Pathology. , , 2005.
  • Computational Metabolic Phenotyping at UCSB Center for Bio-Image and Informatics. , , 2005.
  • St. Louis University, Department of Pharmacologic & Physiologic Sciences. Neural remodeling in retinal degenerations. , , 2004.
  • University of Michigan, Ann Arbor. Computational molecular phenotyping in retinal degenerative diseases. Departments of Bioinformatics and Pharmacology. , , 2004.
  • Stanford University, Department of Ophthalmology. Computational Molecular phenotyping of retinal degenerations. , , 2004.
  • Ophthalmology Grand Rounds. Moran Eye Center. , , 2004.
  • Ophthalmology Grand Rounds, Moran Eye Center. , , 2002.
  • University of Utah Bioinformatics. , , 2001.
  • Physiologic Psychology, University of Arizona Department of Psychology for Dr. R. K. Martinez. , , 1991.
  • Schepens Eye Research Institute, Mass. Eye and Ear, Harvard University Retinal Connectomics and Pathoconnectomics. , , 2021.
  • University of Louisville Ophthalmology Annual Lecture. , , 2014.
  • Classical mixed synapses and other electrical plus chemical synapse topologies in the mammalian retina. Crystal L. Sigulinsky, James R. Anderson, Derya Akbaba, Ethan Kerzner, Alexander Lex, Miriah Meyer, Robert E. Marc, Bryan W. Jones International Gap Junction Conference, 2021. , Presented, 2021.
  • The Aii Amacrine Cell in a Pathoconnectome of Early Retinal Remodeling Rebecca L. Pfeiffer, Jeebika Dahal, James R. Anderson, Crystal L Sigulinsky, Olivia Haddadin, Jia-Hui Yang, Alexis Houser, Jessica C Garcia, Robert E. Marc, Bryan W. Jones RD Meeting 2021, Nashville TN. , Presented, 2021.
  • Elucidation of Retinal Circuitry in Disease. , Presented, 2021.
  • Induction of antibodies against oxidized elastin exacerbates structural and functional damage in mouse models of age-related macular degeneration. Baerbel Rohrer, Crystal Nicholson, Balasubramanian Annamalai, Sarah Stephenson, Carl Atkinson, Bryan W Jones, Nathaniel Parsons IOVS Vol 61 Issue 7 Pages 1115. , Presented, 2020.
  • Restoration of Light-evoked Electrical Signals in the Postmortem Mouse and Human Retina Fatima Abbas; Silke Becker; Bryan W Jones; Anne M Hanneken; Frans Vinberg IOVS Vol 61 Issue 7 Pages 3987. , Presented, 2020.
  • Coupling architecture of the retinal Aii/ON cone bipolar cell network and alteration in degeneration Crystal L. Sigulinsky, Rebecca L. Pfeiffer, James R. Anderson, Christopher Rapp, Jeebika Dahal, Jessica C Garcia, Jia-Hui Yang, Daniel P. Emrich, Hope Morrison, Kevin D. Rapp, Carl B. Watt, Mineo Kondo, Hiroko Terasaki, Robert E. Marc and Bryan W. Jones. , Presented, 2019.
  • Coupling Architecture Of The AII/ON Cone Bipolar Cell Network In Degenerate Retina Crystal L. Sigulinsky, Rebecca L. Pfeiffer, James R. Anderson, Daniel P. Emrich, Christopher Rapp, Jeebika Dahal, Jessica Garcia, Hope Morrison, Kevin D. Rapp, Jia-Hui Yang, Carl B. Watt, Robert E. Marc and Bryan W. Jones. , Presented, 2019.
  • Comparative Anatomy And Connectivity Of The AII Amacrine Cell In Mouse And Rabbit Retina Selena Wirthlin, Crystal L. Sigulinsky, James R. Anderson, Daniel P. Emrich, Christopher Rapp, Jeebika Dahal, Rebecca L. Pfeiffer, Kevin D. Rapp, Jia-Hui Yang, Carl B. Watt, Robert E. Marc and Bryan William Jones. , Presented, 2019.
  • Aii Amacrine Cell Connectivity in Degenerating Retina Jeebika Dahal, Rebecca L. Pfeiffer, Crystal L. Sigulinsky, James R. Anderson, Daniel P. Emrich, Hope Morrison, Jessica C. Garcia, Kevin D. Rapp, Jia-Hui Yang, Carl B. Watt, Mineo Kondo, Hiroko Terasaki, Robert E. Marc and Bryan W. Jones. , Presented, 2019.
  • OFF-layer Branches of ON Cone Bipolar Cells in Early Retinal Degeneration Jessica C. Garcia, Rebecca L. Pfeiffer, Crystal L. Sigulinsky, James R. Anderson, Daniel P. Emrich, Jeebika Dahal, Hope Morrison, Kevin D. Rapp, Jia-Hui Yang, Carl B. Watt, Mineo Kondo, Hiroko Terasaki, Robert E. Marc and Bryan W. Jones. , Presented, 2019.
  • Rod Bipolar Cell Networks In A Retinal Pathoconnectome Rebecca L. Pfeiffer, James R. Anderson, Daniel P. Emrich, Jeebika Dahal, Crystal L. Sigulinsky, Jia-Hui Yang, Kevin D. Rapp, Carl B. Watt, Jessica C. Garcia, Mineo Kondo, Hiroko Terasaki, Robert E. Marc, and Bryan W. Jones. , Presented, 2019.
  • Mapping The Network Architecture of Gap Junctional Coupling Among Parallel Processing Channels In The Mammalian Retina Crystal L. Sigulinsky, James R. Anderson, Ethan Kerzner, Christopher N. Rapp, Rebecca L. Pfeiffer, Daniel P. Emrich, Kevin D. Rapp, Noah T. Nelson, J. Scott Lauritzen, Miriah Meyer, Robert E. Marc, and myself. , Presented, 2019.
  • ISER 2018, Belfast Northern Ireland. , , 2018.
  • Rod Bipolar Cell Networks in Early Retinal Remodeling Rebecca Pfeiffer, James R. Anderson, Daniel P. Emrich, Jeebika Dahal, Crystal L Sigulinsky, Hope AB Morrison, Jia-Hui Yang, Carl B. Watt, Kevin D. Rapp, Jessica C Garcia, Mineo Kondo, Hiroko Terasaki, Robert E. Marc, and myself Bryan W. Jones. , Presented, 2018.
  • Pathoconnectome Analysis of Müller Cells in Early Retinal Remodeling Rebecca Pfeiffer, James R. Anderson, Daniel P. Emrich, Jeebika Dahal, Crystal L Sigulinsky, Hope AB Morrison, Jia-Hui Yang, Carl B. Watt, Kevin D. Rapp, Mineo Kondo, Hiroko Terasaki, Jessica C Garcia, Robert E. Marc, and myself Bryan W. Jones. , Presented, 2018.
  • Coupling Architecture Of The Aii/ON Cone Bipolar Cell Network In The Degenerate Retina Crystal L Sigulinsky, Rebecca L Pfeiffer, James R Anderson, Jeebika Dahal, Hope Morrison, Daniel P. Emrich, Jessica C Garcia, Jia-Hui Yang, Carl B. Watt, Kevin D. Rapp, Mineo Kondo, Hiroko Terasaki, Robert E. Marc, and Bryan W. Jones. , Presented, 2018.
  • AREADNE 2018, Santorini Greece. , Presented, 2018.
  • Structure-Function Correlation Across The Central Visual Field Using Pointwise Comparisons and Ganglion Cell Isocontours Derived From Pattern Recognition Kalloniatis M, Tong J, Yoshioka N, Khuu SK, Phu J, Choi A, Zangerl B, Nivison-Smith L, Bui BV, Marc RE, Jones BW. , Presented, 2018.
  • A Pathoconnectome of Early Retinal Remodeling Rebecca Pfeiffer, Robert E. Marc, James R. Anderson, Daniel P. Emrich, Carl B. Watt, Jia-Hui Yang, Kevin D. Rapp, Jeebika Dahal, Mineo Kondo, Hiroko Terasaki, and Bryan W. Jones. , Presented, 2018.
  • Impact of Glaucoma On Retinal Ganglion Cell Subtypes: A Single-Cell RNA-seq Analysis of the DBA/2J Mouse Siamak Yousefi, Hao Chen, Jesse Ingels, Sumana R. Chintalapudi, Megan Mulligan, myself (Bryan W. Jones), Vanessa Marie Morales-Tirado, Pete Williams, Simon W. John, Felix Struebing, Eldon E. Geisert, Monica Jablonski, Lu Lu, Robert Williams. , Presented, 2018.
  • Metabolic, Excitation and Functional Mapping of Diabetic Retinopathy Felix R. Vazquez-Chona, Tam T.T. Phuong, Oleg Yarishkin, Bryan W. Jones, and David Krizaj. , Presented, 2018.
  • Circuit Remodeling In Retinal Degeneration Bryan W. Jones. , Presented, 2018.
  • Synaptic Inputs To A Gamma Ganglion Cell In Rabbit Retina Andrea Bordt, Diego Perez, Robert E. Marc, James R. Anderson, Carl B. Watt, Bryan W. Jones, Crystal Sigulinsky, James S. Lauritzen, Danny Emrich, Noah Nelson, Luke Tseng, Weiley Liu, and David W. Marshak. , Presented, 2017.
  • Metabolic Impacts of Cigarette Smoke On The Retina of Complement-Compromised Mice Felix Vazquez-Chona, Alex Butler, Emile McKinnon, Baerbel Rohrer and Bryan W. Jones. , Presented, 2017.
  • Predicting Age-related Changes with High Accuracy using a Pattern Recognition Derived Retinal Ganglion Cell Regression Model Nayuta Yoshioka, Barbara Zangerl, Lisa Nivison-Smith, Sieu Khuu, Bryan W. Jones, Rebecca Pfeiffer, Robert Marc, and Michael Kalloniatis. , Presented, 2017.
  • ISER, Neural Retina. Tokyo, Japan. , Presented, 2016.
  • Pattern Recognition Reveals Different Visual Field Signature Patterns When Using Spatially Equated Test Sizes Compared To Standard Goldmann III Alone Michael Kalloniatis, Robert E. Marc, Sieu K. Khuu, Jack Phu, Barbara Zangerl, Lisa Nivison-Smith, Bryan W. Jones, and Rebecca L. Pfeiffer. , Presented, 2016.
  • Metabolic Changes During Late Stage Retinal Degeneration In Heterozygous Crx Mutant Cats (CrxRdy/+) Laurence Occelli, Bryan W. Jones, and Simon M. Petersen-Jones. , Presented, 2016.
  • Progressive Retinal Remodeling In A Transgenic Rabbit Model Of Retinitis Pigmentosa Rebecca L. Pfeiffer, Bryan W. Jones, and Robert E. Marc. , Presented, 2016.
  • 2-nm Resolution Anatomy of Retinal Neuro-Glial-Vascular Architecture Jefferson R. Brown, Rebecca L. Pfeiffer, Crystal Sigulinsky, Felix Vazquez-Chona, Daniel Emrich, Bryan W. Jones, Robert E. Marc. , Presented, 2016.
  • In Situ Metabolomic Signatures Of Neuroprotection, Apoptosis, And Microglial Phagocytosis Felix Vazquez-Chona, Drew Ferrell, Bryan W. Jones and Robert E. Marc. , Presented, 2015.
  • Müller Cell Metabolic Chaos During Degeneration Rebecca L. Pfeiffer, Bryan W. Jones and Robert E. Marc. , Presented, 2015.
  • Glucosamine Trapping As A Measure Of Retinal Glucose Transport Jefferson Brown, Bryan W. Jones, Rebecca Pfeiffer, and Robert Marc. , Presented, 2015.
  • Gene-Edited Human Induced Pluripotent Stem Cell Derived 3D Retinas For Modeling Photoreceptor Development And Disease Karl Wahlin, Catherine Kim, Julien Maruotti, Srinivas Sripathi, Vinod Ranganathan, Kiara Eldred, Bryan W. Jones, Robert Johnston, Cindy Berlinicke, and Donald Zack. , Presented, 2015.
  • Inhibition Of The Alternative pathway Of Complement Accelerates Recovery From Smoke-Induced Functional And Morphological Ocular Injury Baerbel Rohrer, Alex Woodell, Sarah Casey, Tucker Williamson, Bryan W. Jones, Stephen Tomlinson, and Carl Atkinson. , Presented, 2015.
  • Mapping Complete Coupling Networks In The Mammalian Retina Sigulinsky, L Crystal., Lauritzen, J. Scott., Rapp, Christopher N., Sessions, Alex M., Emrech, Daniel P., Rapp, Kevin D., Watt, Carl B., Anderson, James R., Jones, Bryan W., and Marc, Robert E. , Presented, 2015.
  • Ultrastructural Connectomics Reveals The Entire Chemical And Electrical Synaptic Cohort Of An ON Cone Bipolar Cell In The Inner Plexiform Layer Of The Rabbit Retina J. Scott Lauritzen, Crystal L. Sigulinsky, Danny P. Emrich, Joshua M. Dudleston, Noah T. Nelson, Rebecca L. Pfeiffer, Nathan R. Sherbotie, John V. Hoang, Jefferson R. Brown, Carl B. Watt, James R. Anderson, myself and Robert E. Marc. , Presented, 2014.
  • Metabolic Impacts of Cigarette Smoke on RPE and Müller Cells of Complement Compromised Mice Alexandra D. Butler and Bryan W. Jones. , Presented, 2014.
  • Constructive Retinal Plasticity After Selective Ablation of the Photoreceptors Corinne N. Beier, Bryan W. Jones, Philip Huie, Yannis M. Paulus, Daniel Lavinsky, Loh-Shan B. Leung, Hiroyuki Nomoto, Robert E. Marc, Daniel V. Palanker, and Alexander Sher. , Presented, 2013.
  • Retinal Metabolic Response to Cigarette Smoke Alexandra D. Butler, William D. Ferrell, Alex Woodell, Carl Atkinson, Baerbel Rohrer, Robert E. Marc and Bryan W. Jones. , Presented, 2013.
  • Pure Feedforward Amacrine Cells Robert E. Marc, Felix R. Vazquez-Chona, John V. Hoang, Crystal Sigulinsky, Carl B. Watt, Bryan W. Jones, James R. Anderson and J. Scott Lauritzen. , Presented, 2013.
  • Tiered Cross-Class Bipolar Cell Gap Junctional Coupling in the Rabbit Retina J. Scott Lauritzen, John V. Hoang, Crystal Sigulinsky, Bryan W. Jones, James R. Anderson, Carl B. Watt, Shoeb Mohammed and Robert E. Marc. , Presented, 2013.
  • Sparse Network Principles of GABAergic Amacrine Cell Heterocellular Coupling Crystal L. Sigulinsky, J. Scott Lauritzen, John V. Hoang, Carl B. Watt, Bryan W. Jones, James R. Anderson, Shoeb Mohammed and Robert E. Marc. , Presented, 2013.
  • Retinal Remodeling in a Rat Model of the Smith-Lemli-Opitz Syndrome (SLOS) Steven J. Fliesler, Christopher C. Goulah, W. Drew Ferrell, Robert E. Marc and Bryan W. Jones. , Presented, 2013.
  • Connectomics Analysis of Rod-Cone Interaction Networks J. Scott Lauritzen, James R. Anderson, Carl B. Watt, Bryan W. Jones and Robert E. Marc. , Presented, 2012.
  • The Alternative Complement Pathway Mediates Functional And Morphological Deficits In A Smoke Model Of Age-Related Macular Degeneration Alex Woodell, Beth Coughlin, Kannan Kunchithapautham, Tucker Williamson, Carl Atkinson, William Ferrell, Bryan W. Jones and Bärbel Rohrer. , Presented, 2012.
  • The Synaptic Basis of Rod-Cone Pathway Interactions Robert E. Marc, J. Scott Lauritzen, Bryan W. Jones, Carl B. Watt and James R. Anderson. , Presented, 2012.
  • Retinal Metabolic Response to Cigarette Smoke Alexandra D. Butler, William D. Ferrell, Alex Woodell, Carl Atkinson, Bärbel Rohrer, Robert E. Marc and Bryan W. Jones. , Presented, 2012.
  • Diffusely-Stratified OFF Cone Bipolar Cell Inputs to Amacrine Cells in the ON Inner Plexiform Layer J. Scott Lauritzen, Bryan W. Jones, Carl B. Watt, Shoeb Mohammed, James R. Anderson, Robert E. Marc. , Presented, 2012.
  • Histologic Correlation of OCT With Diseased Retina In Humans W. Drew Ferrell, Lloyd Williams, Carl B. Watt, James R. Anderson, Robert E. Marc and Bryan W. Jones. , Presented, 2012.
  • Metabolic Profiling of Activated Retinal Glia Felix Vazquez-Chona, William Drew Ferrell, Ed Levine, Bryan William Jones and Robert E. Marc. , Presented, 2011.
  • Bipolar Cell “Accessory ON” Input to Amacrine Cells in the OFF Inner Plexiform Layer J. Scott Lauritzen, Bryan W. Jones, Carl B. Watt, Shoeb Mohammed, James R. Anderson and Robert E. Marc. , Presented, 2011.
  • Visual Restoration And Circuitry-Retinal Sheet Transplants To Rats With Retinal Degeneration Robert B. Aramant, Bryan W. Jones, Magdalene J. Seiler, Pamela B. Yang, Hans S. Keirstead and Robert E. Marc. , Presented, 2011.
  • Short and Long-Term Changes in the Retina of a Xenopus laevis P23H mutant rhodopsin model of retinitis pigmentosa J. Damian C. Lee, Beatrice M. Tam, Felix Vazquez-Chona, W. Drew Ferrell, Bryan W. Jones, Robert E. Marc and Orson L. Moritz. , Presented, 2011.
  • Low-Level Gestational Lead Exposure Induces Metabolic Changes in Developing Mouse Retina Drew Ferrell, Shauntay Chaney, Donald Fox, Robert E. Marc and Bryan W. Jones. , Presented, 2011.
  • CaMKII Signaling is Contributive to Neuritogenesis in Light-Induced Retinal Degeneration Yanhua Lin, Bryan W. Jones, Kevin Rapp, Marguerite V. Shaw, Jia-Hui Yang, Carl B. Watt and Robert E. Marc. , Presented, 2011.
  • Neural Activity in the Inner Retina After Photocoagulation Bryan W. Jones, Phil Huie, Haimei Wang, Alexander Sher, Robert E. Marc and Daniel Palanker. , Presented, 2011.
  • Metabolic Mapping of Retinal Photoreceptor Mediated Degenerations WD Ferrell, Vazquez-Chona FR, Jones BW, and Marc RE. , Presented, 2010.
  • Computational Molecular Phenotyping and Excitation Mapping in a Human Patient with Retinitis Pigmentosa Bryan W. Jones, Robert E. Marc. , Presented, 2010.
  • Metabolic Profiling of Photoreceptor Degeneration Felix Vazquez-Chona, Bryan W. Jones, and Robert E. Marc. , Presented, 2010.
  • The Metabolic Response of Müller Glial Cells to Photoreceptor Degeneration Vazquez-Chona FR, Ferrell WD, Jones BW, and Marc RE. , Presented, 2010.
  • Retinal Migration Into 3-Dimensional Subretinal Prosthetic Implants. P Huie1A, I Chan1B, A Vankov1A, A Butterwick1C, M Marmor1B, MS Blumenkranz1B, BW Jones2, D Palanker1A. AOphthalmology and Hansen Exptl. Physics Lab, BOphthalmology, CHansen Exptl. Physics Lab, 1Stanford, Stanford, CA; 2Moran Eye Center, University of Utah, UT. Assoc Res Vision & Ophthalmology 2006. , , 2006.
  • Partial Circuitry Rescue By Cones In Retinitis Pigmentosa. BW Jones, K. Kinnard, DW Marshak, RE Marc. John A Moran Eye Center, University of Utah, Salt Lake City, UT. University Texas Medical School, Houston TX. Assoc Res Vision & Ophthalmology 2006. , , 2006.
  • Visualization of Light and Ligand Activated Signaling in the Primate Retina. RE Marc1A, BW Jones1A, JR Anderson1B, DW Marshak2. AOphthalmology, BNeuroscience Program, 1Univ Utah, Salt Lake City, UT; 2Neurobiology & Anatomy, Univ Texas Med Sch, Houston, TX. Assoc Res Vision & Ophthalmology 2006. , , 2006.
  • Neural plasticity revealed by light-induced photoreceptor lesions. BW Jones, RE Marc, CB Watt, DK Vaughan, DT Organisciak. Univ Utah/Moran Eye Center, Salt Lake City, UT; Biology, University of Wisconsin Oshkosh, Oshkosh, WI; Biochemistry and Molecular Biology, Wright State University, Dayton, OH. XI International Symposium on Retinal Degeneration, Perth Australia. , , 2004.
  • Severe remodeling of the mouse neural retina triggered by rod degeneration. Jones BW, Chen CK, Watt CB, Frederick JM, Huang W, Baehr W, Marc RE. 2002 Ophthalmology, Univ Utah/Moran Eye Center, Salt Lake City, UT Assoc Res Vision & Ophthalmology. , , 2002.
  • Molecular phenotyping of the neural retina in retinitis pigmentosa. Marc RE, Jones BW, Yang JH, Shaw MV and Milam AH. 2001 Moran Eye Center, Univ Utah, Salt Lake City, UT; Scheie Eye Institute, Univ Penn, Philadelphia, PA. Assoc Res Vision & Ophthalmology. , , 2001.
  • Google ORDCamp. Other, , 2020.
  • Google SciFoo. Other, , 2019.
  • ORDCamp. Other, , 2019.
  • Google ORDCamp, Chicago. Other, , 2018.
  • Google SciFoo. Other, , 2017.
  • Google SciFoo. Other, , 2016.
  • T. Tasdizen, R. Whitaker, R. Marc and B. Jones, "Enhancement of Cell Boundaries in Transmission Microscopy Images". Proceedings of International Conference on Image Processing (ICIP), Vol. 2, pp. 129-132, September, 2005. , , 2005.
  • The Chx10,p27Kip1-Double Null Retina Contains Cone Bipolar Cells, but Remains Severely Compromised in Visual Function. E.M. Levine, Y.Sauve, B.W. Jones, E.S. Green, R.Marc. John A Moran Eye Center, University of Utah, Salt Lake City, UT. Assoc Res Vision & Ophthalmology 2005. , , 2005.
  • Cell Cycle Alterations in Chx10 Null and Chx10, p27Kip1 Double Null Retinal Progenitor Cells Reveal the Importance of Proliferation Rate in Promoting Retinal Development. T.M. Raleigh, E.S. Green, B.W. Jones, R.Marc, E.M. Levine. John A Moran Eye Center, University of Utah, Salt Lake City, UT. Assoc Res Vision & Ophthalmology 2005. , , 2005.
  • Excitation Mapping in a Rodent Seizure Model. DK Takahashi, BW Jones, RE Marc, K Wilcox. American Epilepsy Society, 58th Annual Meeting, 2004. Abstract 1.040. , , 2004.
  • Computational Molecular Phenotyping (CMP) of the Platyhelminth Schmidtea Mediterranea. LA Hunt, BW Jones, RE Marc. Program No. 373.3 Society for Neuroscience 2004. , , 2004.
  • Dopamine Amacrine and Interplexiform Cells Exhibit Glutamatergic Signatures. BW Jones, CB Watt, RE Marc. Ophthalmology, Univ Utah/Moran Eye Center, Salt Lake City, UT Assoc Res Vision & Ophthalmology 2004. PDF. , , 2004.
  • Complex Rewiring in Retinal Remodeling. CB Watt, BW Jones, J-H Yang, RE Marc. Ophthalmology, Univ Utah/Moran Eye Center, Salt Lake City, UT Assoc Res Vision & Ophthalmology 2004. PDF. , , 2004.
  • Excitatory Self Signaling in Retinal Remodeling. Marc RE, BW Jones. Ophthalmology, Univ Utah/Moran Eye Center, Salt Lake City, UT Assoc Res Vision & Ophthalmology 2004. PDF. , , 2004.
  • Phenotyping neurons with pattern recognition of molecular mixtures. Marc RE, BW Jones 2003. IEEE, Intermational Symposium on Signal Processing and its Applications, S1571. PDF. , , 2003.
  • Retinal Remodeling Triggered by Light Damage in the Albino Rat. B. W. Jones, C. B. Watt, R. E. Marc. Ophthalmology, Univ Utah/Moran Eye Center, Salt Lake City, UT Assoc Res Vision & Ophthalmology 2003. PDF. , , 2003.
  • Circuitry in the rabbit inner plexiform layer: Enhanced analysis with deep-etch EM immunogold. Watt CB, Yang J, Jones BW, Shaw MV, Marc RE. 2002 Ophthalmology, Univ Utah/Moran Eye Center, Salt Lake City, UT Assoc Res Vision & Ophthalmology. , , 2002.
  • Computational molecular phenotyping. Visualizing cellular chemistry. Marc RE , Jones BW. 2001 Moran Eye Center, Univ. of Utah, Salt Lake City, UT First International Symposium on computational Cell Biology. , , 2001.
  • Nested feedback and Concatenated Inhibition In The Rabbit Inner Plexiform Layer. Watt CB, Yang JH, Jones BW and Marc RE. 2001 Moran Eye Center, Univ. of Utah, Salt Lake City, UT Assoc Res Vision & Ophthalmology. , , 2001.
  • Aberrant remodeling of the neural retina in the GHL transgenic mouse. Jones BW, Marc RE, Frederick JM, Baehr W, et al. 2001 Moran Eye Center, Univ Utah, Salt Lake City, UT Fifth Annual Vision research Conference. PDF. , , 2001.
  • Biochemical signature analysis of the human ganglion cell layer. BW Jones, Marc RE , Watt CB, Shaw MV and Yang JH. 2000 Moran Eye Center, Univ.Utah, Salt Lake City, UT. Assoc Res Vision & Ophthalmology. , , 2000.
  • Studies examining the neurotransmitter properties of horizontal cell populations in the goldfish retina. CB Watt, M Kalloniatis, BW Jones and RE Marc 2000 Moran Eye Center, Univ. of Utah, Salt Lake City, UT. Assoc Res Vision & Ophthalmology. , , 2000.
  • The molecular signature of all types of rabbit retinal ganglion cells. RE Marc, BW Jones, CB Watt, MV Shaw and J-H Yang 2000 Moran Eye Center, Univ. Utah, Salt Lake City, UT. Assoc Res Vision & Ophthalmology. , , 2000.
  • Neurochemical subtypes of LGNd neurons in the cat LGNd and PGN. MT Schmolesky, BW Jones, Y-C, Wang, AG Leventhal, and RE Marc 1999 Department of Neurobiology and Anatomy1 and Moran Eye Center2, Univ. Utah, Salt Lake City, UT. Assoc Res Vision & Ophthalmology. , , 1999.
  • Ionotropic glutamatergic drive histories of amacrine cell layer neurons reported by 1-amino-4-guanidobutane (AGB) in vivo. BW Jones, J Howard, A Beg, CB Watt, and RE Marc 1999 Moran Eye Center, Univ. Utah, Salt Lake City, UT. Assoc Res Vision & Ophthalmology. , , 1999.

Languages

  • English, Fluent.

Publications

  • Lauritzen JS, Jones BW, Watt CB, Mohammed S, Anderson JR, Marc RE. (date unknown). Diffusely-Stratified OFF Cone Bipolar Cell Inputs to Amacrine Cells in the ON Inner Plexiform Layer. Accepted, .
  • Bryan W. Jones, and Robert E. Marc. (date unknown). Retinal Connectomics. Elsevier. Accepted, .
  • V Jagadeesh, BS Manjunath, J Anderson, B Jones, R Marc, SK Fisher (date unknown). Online parameter estimation in dynamic Markov Random Fields for image sequence analysis. Institute of Electrical and Electronics Engineers. Accepted, .
  • Jones BW, Lewis GP (date unknown). Special issue on retinal remodeling. Vol. 150, 1-3. Accepted, .
  • Tong J, Phu J, Khuu SK, Yoshioka N, Choi AY, Nivison-Smith L, Marc RE, Jones BW, Pfeiffer RL, Kalloniatis M, Zangerl B (date unknown). Development of a Spatial Model of Age-Related Change in the Macular Ganglion Cell Layer to Predict Function From Structural Changes. Vol. 208, 166-177. Accepted, .
  • Marc RE, Kalloniatis M, Jones BW (date unknown). Excitation mapping with the organic cation AGB2+. Vol. 45, 3454-68. Accepted, .
  • Marc RE, Sigulinsky CL, Pfeiffer RL, Emrich D, Anderson JR, Jones BW (date unknown). Heterocellular Coupling Between Amacrine Cells and Ganglion Cells. Vol. 12, 90. Accepted, .
  • Rohrer B, Parsons N, Annamalai B, Nicholson C, Obert E, Jones BW, Dick AD (date unknown). Peptide-based immunotherapy against oxidized elastin ameliorates pathology in mouse model of smoke-induced ocular injury. Vol. 212, 108755. Accepted, .
  • Marc RE, Jones BW, Watt CB, Anderson JR, Sigulinsky C, Lauritzen S (date unknown). Retinal connectomics: towards complete, accurate networks. Vol. 37, 141-62. Accepted, .
  • Tasdizen T, Koshevoy P, Grimm BC, Anderson JR, Jones BW, Watt CB, Whitaker RT, Marc RE (date unknown). Automatic mosaicking and volume assembly for high-throughput serial-section transmission electron microscopy. Vol. 193, 132-44. Accepted, .
  • Pfeiffer RL, Anderson JR, Dahal J, Garcia JC, Yang JH, Sigulinsky CL, Rapp K, Emrich DP, Watt CB, Johnstun HA, Houser AR, Marc RE, Jones BW (date unknown). A pathoconnectome of early neurodegeneration: Network changes in retinal degeneration. Vol. 199, 108196. Accepted, .
  • Jones BW, Kondo M, Terasaki H, Watt CB, Rapp K, Anderson J, Lin Y, Shaw MV, Yang JH, Marc RE (date unknown). Retinal remodeling in the Tg P347L rabbit, a large-eye model of retinal degeneration. Vol. 519, 2713-33. Accepted, .
  • Marc RE, Jones BW (date unknown). Retinal remodeling in inherited photoreceptor degenerations. Vol. 28, 139-47. Accepted, .
  • Jones BW, Watt CB, Frederick JM, Baehr W, Chen CK, Levine EM, Milam AH, Lavail MM, Marc RE (date unknown). Retinal remodeling triggered by photoreceptor degenerations. Vol. 464, 1-16. Accepted, .
  • Marc RE, Anderson JR, Jones BW, Sigulinsky CL, Lauritzen JS (date unknown). The AII amacrine cell connectome: a dense network hub. Vol. 8, 104. Accepted, .
  • Nagarajan N, Jones BW, West PJ, Marc RE, Capecchi MR (date unknown). Corticostriatal circuit defects in Hoxb8 mutant mice. Vol. 23, 1868-1877. Accepted, .
  • Phu J, Khuu SK, Nivison-Smith L, Zangerl B, Choi AYJ, Jones BW, Pfeiffer RL, Marc RE, Kalloniatis M (date unknown). Pattern Recognition Analysis Reveals Unique Contrast Sensitivity Isocontours Using Static Perimetry Thresholds Across the Visual Field. Vol. 58, 4863-4876. Accepted, .
  • Pfeiffer RL, Marc RE, Kondo M, Terasaki H, Jones BW (date unknown). Müller cell metabolic chaos during retinal degeneration. Vol. 150, 62-70. Accepted, .
  • Merriman DK, Sajdak BS, Li W, Jones BW (date unknown). Seasonal and post-trauma remodeling in cone-dominant ground squirrel retina. Vol. 150, 90-105. Accepted, .
  • Jones BW, Pfeiffer RL, Ferrell WD, Watt CB, Marmor M, Marc RE (date unknown). Retinal remodeling in human retinitis pigmentosa. Vol. 150, 149-65. Accepted, .
  • Jones BW, Watt CB, Marc RE (date unknown). Retinal remodelling. Vol. 88, 282-91. Accepted, .
  • Marc RE, Jones BW, Watt CB, Strettoi E (date unknown). Neural remodeling in retinal degeneration. Vol. 22, 607-55. Accepted, .
  • Choi AYJ, Nivison-Smith L, Phu J, Zangerl B, Khuu SK, Jones BW, Pfeiffer RL, Marc RE, Kalloniatis M (date unknown). Contrast sensitivity isocontours of the central visual field. Vol. 9, 11603. Accepted, .
  • Marc RE, Jones BW, Lauritzen JS, Watt CB, Anderson JR (date unknown). Building retinal connectomes. Vol. 22, 568-74. Accepted, .
  • Ning K, Sendayen BE, Kowal TJ, Wang B, Jones BW, Hu Y, Sun Y (date unknown). Primary Cilia in Amacrine Cells in Retinal Development. Vol. 62, 15. Accepted, .
  • Lorach H, Kung J, Beier C, Mandel Y, Dalal R, Huie P, Wang J, Lee S, Sher A, Jones BW, Palanker D (date unknown). Development of Animal Models of Local Retinal Degeneration. Vol. 56, 4644-52. Accepted, .
  • Jones BW, Kondo M, Terasaki H, Lin Y, McCall M, Marc RE (date unknown). Retinal remodeling. Vol. 56, 289-306. Accepted, .
  • Marc RE, Jones BW, Anderson JR, Kinard K, Marshak DW, Wilson JH, Wensel T, Lucas RJ (date unknown). Neural reprogramming in retinal degeneration. Vol. 48, 3364-71. Accepted, .
  • Kyle Loizos, Robert Marc, Mark Humayun, James R Anderson, Bryan W Jones, Gianluca Lazzi (date unknown). Increasing Electrical Stimulation Efficacy in Degenerated Retina: Stimulus Waveform Design in a Multiscale Computational Model. 1111-1120. Accepted, .
  • Sigulinsky CL, Anderson JR, Kerzner E, Rapp CN, Pfeiffer RL, Rodman TM, Emrich DP, Rapp KD, Nelson NT, Lauritzen JS, Meyer M, Marc RE, Jones BW (date unknown). Network Architecture of Gap Junctional Coupling among Parallel Processing Channels in the Mammalian Retina. Vol. 40, 4483-4511. Accepted, .
  • Annamalai B, Parsons N, Nicholson C, Joseph K, Coughlin B, Yang X, Jones BW, Tomlinson S, Rohrer B (date unknown). Natural immunoglobulin M-based delivery of a complement alternative pathway inhibitor in mouse models of retinal degeneration. Vol. 207, 108583. Accepted, .
  • Kosta P, Iseri E, Loizos K, Paknahad J, Pfeiffer RL, Sigulinsky CL, Anderson JR, Jones BW, Lazzi G (date unknown). Model-based comparison of current flow in rod bipolar cells of healthy and early-stage degenerated retina. Vol. 207, 108554. Accepted, .
  • Ayton LN, Barnes N, Dagnelie G, Fujikado T, Goetz G, Hornig R, Jones BW, Muqit MMK, Rathbun DL, Stingl K, Weiland JD, Petoe MA (date unknown). An update on retinal prostheses. Vol. 131, 1383-1398. Accepted, .
  • Kerzner E, Lex A, Sigulinsky CL, Umess T, Jones BW, Marc RE, Meyer M (date unknown). Graffinity: Visualizing Connectivity in Large Graphs. Vol. 36, 251-260. Accepted, .
  • Yoshioka N, Zangerl B, Nivison-Smith L, Khuu SK, Jones BW, Pfeiffer RL, Marc RE, Kalloniatis M (date unknown). Pattern Recognition Analysis of Age-Related Retinal Ganglion Cell Signatures in the Human Eye. Vol. 58, 3086-3099. Accepted, .
  • Jurrus E, Paiva ARC, Watanabe S, Jorgensen EM, Anderson JR, Jones BW, Whitaker R, Marc R, Tasdizen T (date unknown). Detection of neuron membranes in electron microscopy images using auto-context. Accepted, .
  • Jurrus E, Whitaker R, Jones BW, Marc R, Tasdizen T (date unknown). AN OPTIMAL-PATH APPROACH FOR NEURAL CIRCUIT RECONSTRUCTION. Vol. 2008, 1609-1612. Accepted, .
  • Heng JS, Rattner A, Stein-O'Brien GL, Winer BL, Jones BW, Vernon HJ, Goff LA, Nathans J (date unknown). Hypoxia tolerance in the Norrin-deficient retina and the chronically hypoxic brain studied at single-cell resolution. Vol. 116, 9103-9114. Accepted, .
  • Jones BW, Pfeiffer RL, Ferrell WD, Watt CB, Tucker J, Marc RE (date unknown). Retinal Remodeling and Metabolic Alterations in Human AMD. Vol. 10, 103. Accepted, .
  • Marc RE, Jones BW, Watt CB, Vazquez-Chona F, Vaughan DK, Organisciak DT (date unknown). Extreme retinal remodeling triggered by light damage: implications for age related macular degeneration. Vol. 14, 782-806. Accepted, .
  • Wahlin KJ, Maruotti JA, Sripathi SR, Ball J, Angueyra JM, Kim C, Grebe R, Li W, Jones BW, Zack DJ (date unknown). Photoreceptor Outer Segment-like Structures in Long-Term 3D Retinas from Human Pluripotent Stem Cells. Vol. 7, 766. Accepted, .
  • Annamalai B, Parsons N, Nicholson C, Obert E, Jones B, Rohrer B (date unknown). Subretinal Rather Than Intravitreal Adeno-Associated Virus-Mediated Delivery of a Complement Alternative Pathway Inhibitor Is Effective in a Mouse Model of RPE Damage. Vol. 62, 11. Accepted, .
  • Pfeiffer RL, Marc RE, Jones BW (date unknown). Müller Cell Metabolic Signatures: Evolutionary Conservation and Disruption in Disease. Vol. 31, 320-329. Accepted, .
  • Woodell A, Jones BW, Williamson T, Schnabolk G, Tomlinson S, Atkinson C, Rohrer B (date unknown). A Targeted Inhibitor of the Alternative Complement Pathway Accelerates Recovery From Smoke-Induced Ocular Injury. Vol. 57, 1728-37. Accepted, .
  • Lauritzen JS, Anderson JR, Jones BW, Watt CB, Mohammed S, Hoang JV, Marc RE (date unknown). ON cone bipolar cell axonal synapses in the OFF inner plexiform layer of the rabbit retina. Vol. 521, 977-1000. Accepted, .
  • Barabas P, Liu A, Xing W, Chen CK, Tong Z, Watt CB, Jones BW, Bernstein PS, Križaj D (date unknown). Role of ELOVL4 and very long-chain polyunsaturated fatty acids in mouse models of Stargardt type 3 retinal degeneration. Vol. 110, 5181-6. Accepted, .
  • Molnár T, Yarishkin O, Iuso A, Barabas P, Jones B, Marc RE, Phuong TT, Križaj D (date unknown). Store-Operated Calcium Entry in Müller Glia Is Controlled by Synergistic Activation of TRPC and Orai Channels. Vol. 36, 3184-98. Accepted, .
  • Annamalai B, Nicholson C, Parsons N, Stephenson S, Atkinson C, Jones B, Rohrer B (date unknown). Immunization Against Oxidized Elastin Exacerbates Structural and Functional Damage in Mouse Model of Smoke-Induced Ocular Injury. Vol. 61, 45. Accepted, .
  • Anderson JR, Jones BW, Yang JH, Shaw MV, Watt CB, Koshevoy P, Spaltenstein J, Jurrus E, U V K, Whitaker RT, Mastronarde D, Tasdizen T, Marc RE (date unknown). A computational framework for ultrastructural mapping of neural circuitry. Vol. 7, e1000074. Accepted, .
  • Bryan CD, Casey MA, Pfeiffer RL, Jones BW, Kwan KM (date unknown). Optic cup morphogenesis requires neural crest-mediated basement membrane assembly. Vol. 147. Accepted, .
  • Lin Y, Jones BW, Liu A, Vazquéz-Chona FR, Lauritzen JS, Ferrell WD, Marc RE (date unknown). Rapid glutamate receptor 2 trafficking during retinal degeneration. Vol. 7, 7. Accepted, .
  • D. Lee, F.V-Chona, W. Ferrell, B. Tam, B.W. Jones, R.E. Marc, O. Moritz (date unknown). Dysmorphic Photoreceptors in a P23H Mutant Rhodopsin Model of Retinitis Pigmentosa are Metabolically Active and Capable of Regenerating to Reverse Retinal Degeneration. Vol. 32, 2121-2128. Accepted, .
  • Anderson JR, Jones BW, Watt CB, Shaw MV, Yang JH, Demill D, Lauritzen JS, Lin Y, Rapp KD, Mastronarde D, Koshevoy P, Grimm B, Tasdizen T, Whitaker R, Marc RE (date unknown). Exploring the retinal connectome. Vol. 17, 355-79. Accepted, .
  • Ross JW, Fernandez de Castro JP, Zhao J, Samuel M, Walters E, Rios C, Bray-Ward P, Jones BW, Marc RE, Wang W, Zhou L, Noel JM, McCall MA, DeMarco PJ, Prather RS, Kaplan HJ (date unknown). Generation of an inbred miniature pig model of retinitis pigmentosa. Vol. 53, 501-507. Accepted, .
  • Marc RE, Jones BW (date unknown). Molecular phenotyping of retinal ganglion cells. Vol. 22, 413-27. Accepted, .
  • Pfeiffer RL, Marc RE, Jones BW (date unknown). Persistent remodeling and neurodegeneration in late-stage retinal degeneration. Vol. 74, 100771. Accepted, .
  • Pfeiffer RL, Anderson JR, Emrich DP, Dahal J, Sigulinsky CL, Morrison HAB, Yang JH, Watt CB, Rapp KD, Kondo M, Terasaki H, Garcia JC, Marc RE, Jones BW (date unknown). Pathoconnectome Analysis of Müller Cells in Early Retinal Remodeling. Vol. 1185, 365-370. Accepted, .
  • Lauritzen JS, Sigulinsky CL, Anderson JR, Kalloniatis M, Nelson NT, Emrich DP, Rapp C, McCarthy N, Kerzner E, Meyer M, Jones BW, Marc RE (date unknown). Rod-cone crossover connectome of mammalian bipolar cells. Vol. 527, 87-116. Accepted, .
  • Frech TM, Boynton K, Downs-Kelly E, Jones B, Kriesel JD, Peterson K (date unknown). Eosinophilic Esophagitis in Two Patients with Systemic Sclerosis. Vol. 2016, 6410421. Accepted, .
  • Lin Y, Jones BW, Liu A, Tucker JF, Rapp K, Luo L, Baehr W, Bernstein PS, Watt CB, Yang JH, Shaw MV, Marc RE (date unknown). Retinoid receptors trigger neuritogenesis in retinal degenerations. Vol. 26, 81-92. Accepted, .
  • Anderson JR, Mohammed S, Grimm B, Jones BW, Koshevoy P, Tasdizen T, Whitaker R, Marc RE (date unknown). The Viking viewer for connectomics: scalable multi-user annotation and summarization of large volume data sets. Vol. 241, 13-28. Accepted, .
  • Jones BW, Marc RE, Pfeiffer RL, Kolb H, Fernandez E, Nelson R (date unknown). Retinal Degeneration, Remodeling and Plasticity. University of Utah Health Sciences Center. Accepted, .
  • Jones BW, Marc RE (date unknown). Retinal remodeling during retinal degeneration. (pp. 123-37). Vol. 81. Accepted, .